The Real Cuban Missile Crisis - Benjamin Schwarz - The Atlantic:
Although Kennedy in fact agreed to the missile swap and, with  Khrushchev, helped settle the confrontation maturely, the legacy of that  confrontation was nonetheless pernicious. By successfully hiding the  deal from the vice president, from a generation of foreign-policy makers  and strategists, and from the American public, Kennedy and his team  reinforced the dangerous notion that firmness in the face of what the  United States construes as aggression, and the graduated escalation of  military threats and action in countering that aggression, makes for a  successful national-security strategy—really, all but defines it.
The president and his advisers also reinforced the concomitant view  that America should define a threat not merely as circumstances and  forces that directly jeopardize the safety of the country, but as  circumstances and forces that might indirectly compel potential allies  or enemies to question America’s resolve. This recondite calculation led  to the American disaster in Vietnam: in attempting to explain how the  loss of the strategically inconsequential country of South Vietnam might  weaken American credibility and thereby threaten the country’s  security, one of McNamara’s closest aides, Assistant Secretary of  Defense John McNaughton, allowed that “it takes some sophistication to  see how Vietnam automatically involves” our vital interests.